BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E06SP1|AL428562
(549 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig951 812 0.0
>3x_Contig951
Length = 2832
Score = 812 bits (377), Expect = 0.0
Identities = 473/549 (86%)
Strand = Plus / Minus
Query: 1 atcagcatcttcgcagawaaacatgcactaacgcggwtagagatgacgwtktgaggwwww 60
||||||||||||||||| |||||||||||||||||| ||||||||||| | |||||
Sbjct: 725 atcagcatcttcgcagaaaaacatgcactaacgcggatagagatgacgatgtgaggaaaa 666
Query: 61 acccgtttcgacaaatwatatttckttttgwwkctwatyagcgatgacacagcctatwty 120
|||||||||||||||| | ||||| ||||| || || |||||||||||||||||| |
Sbjct: 665 acccgtttcgacaaataagatttcgttttgaagctaatcagcgatgacacagcctatatc 606
Query: 121 akatttttwtyakttaggtwtgawcggtccattggcattgwwatwtcactctcagcgttg 180
| |||||| | | | |||| ||| |||||||||||||||| || |||||||||||||||
Sbjct: 605 agatttttatcagtaaggtatgaacggtccattggcattgaaatatcactctcagcgttg 546
Query: 181 cgcccgawtttctaggagcgcatcawattgaaggtacgcccctatctagagaattctckt 240
||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| |
Sbjct: 545 cgcccgaatttctaggagcgcatcaaattgaaggtacgcccctatctagagaatgctcgt 486
Query: 241 wtgataattawaaactagaagcgaagaaaaawatwawawwwwakatcackgaataacaat 300
||||||| | |||||||||||||||||||| || | | | ||||| ||||||||||
Sbjct: 485 atgataatgaaaaactagaagcgaagaaaaaaataaaaaaaaagatcacggaataacaat 426
Query: 301 ycactkggattttwwttwatcccatwwwtgawaakwatyktkataatawawwwkctctat 360
|||| |||||| || ||||||| || || || | |||| | | ||||||
Sbjct: 425 ccactgggatttgaattaatcccataaaggaaaagaatcgtgataagaaaaaagctctat 366
Query: 361 ygcagatgccacaactwaggtttcctttttcttatttttttttkcttagtttttttwttt 420
||||||||||||||| |||||||||||||||||||||||| | |||||||||| | ||
Sbjct: 365 cgcagatgccacaactaaggtttcctttttcttatttttttatgcttagtttttgtattg 306
Query: 421 tctttcttggagcttackttactattccataatatgctatggattagagaataagggrtt 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 305 tctttcttggagcttacgttactattccataatatgctatggattagagaataagggatt 246
Query: 481 acggagaataccgacgcttcgtcgtttactcatctcggaaagaagtaacgttagggtagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 acggagaataccgacgcttcgtcgtttactcatctcggaaagaagtaacgttagggtagc 186
Query: 541 tgcaamaag 549
||||| |||
Sbjct: 185 tgcaacaag 177
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.49 0.729 1.40
Gapped
Lambda K H
1.49 0.729 1.40
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1971
Number of Sequences: 1807
Number of extensions: 1971
Number of successful extensions: 244
Number of sequences better than 1.0e-20: 1
length of query: 549
length of database: 10,358,551
effective HSP length: 15
effective length of query: 534
effective length of database: 10,331,446
effective search space: 5516992164
effective search space used: 5516992164
T: 0
A: 40
X1: 5 (10.8 bits)
X2: 13 (28.0 bits)
S1: 11 (24.1 bits)
S2: 46 (99.5 bits)